{ "_id": "6a105400acfb0bcc41ca1f2e", "Package": "logbin", "Title": "Relative Risk Regression Using the Log-Binomial Model", "Description": "Methods for fitting log-link GLMs and GAMs to binomial\ndata, including EM-type algorithms with more stable convergence\nproperties than standard methods.", "Version": "2.0.6.9000", "Authors@R": "c(person(\"Mark W.\", \"Donoghoe\", email = \"markdonoghoe@gmail.com\", role = c(\"aut\",\"cre\"),\ncomment = c(ORCID = \"0000-0003-0212-6443\")),\nperson(\"Ian C.\", \"Marschner\", role = \"ths\",\ncomment = c(ORCID = \"0000-0002-6225-1572\")),\nperson(\"Alexandra C.\", \"Gillett\", role = \"ctb\",\ncomment = c(\"wrote an initial version of the nplbin function\",\nORCID = \"0000-0002-5069-3197\")),\nperson(\"The R Core Team\", role = \"cph\",\ncomment = \"summary.logbin, anova.logbin and others are based on stats::glm-related functions\"))", "License": "GPL (>= 2)", "URL": "https://github.com/mdonoghoe/logbin", "Config/testthat/edition": "3", "Date": "2025-04-07", "Repository": "https://mdonoghoe.r-universe.dev", "Date/Publication": "2025-04-06 21:44:28 UTC", "RemoteUrl": "https://github.com/mdonoghoe/logbin", "RemoteRef": "HEAD", "RemoteSha": "5c4966853f7043909d2c9961265e662260988992", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-09 08:45:08 UTC", "User": "root" }, "Author": "Mark W. Donoghoe [aut, cre] (ORCID:\n),\nIan C. Marschner [ths] (ORCID: ),\nAlexandra C. Gillett [ctb] (wrote an initial version of the nplbin\nfunction, ORCID: ),\nThe R Core Team [cph] (summary.logbin, anova.logbin and others are\nbased on stats::glm-related functions)", "Maintainer": "Mark W. Donoghoe ", "MD5sum": "50cd2e88df1286e0eb420082a2d7591e", "_user": "mdonoghoe", "_type": "src", "_file": "logbin_2.0.6.9000.tar.gz", "_fileid": "a47e583a2e3a979a6e35ab230a95f461efbb2e185a06ef076d41a87cb7ab65b2", "_filesize": 268542, "_sha256": "a47e583a2e3a979a6e35ab230a95f461efbb2e185a06ef076d41a87cb7ab65b2", "_created": "2026-05-09T08:45:08.000Z", "_published": "2026-05-22T13:02:56.106Z", "_distro": "noble", "_jobs": [ { "job": 77384757051, "time": 192, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6894430129" }, { "job": 77384756504, "time": 194, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6894429506" }, { "job": 77384756802, "time": 160, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "6894426500" }, { "job": 77384756415, "time": 111, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6894421950" }, { "job": 77384755872, "time": 162, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6894410784" }, { "job": 77384755674, "time": 146, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7161136320" }, { "job": 77384756705, "time": 130, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "6894423604" }, { "job": 77384756835, "time": 155, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "6894426021" }, { "job": 77384756807, "time": 160, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "6894426463" } ], "_buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/mdonoghoe/logbin", "_commit": { "id": "5c4966853f7043909d2c9961265e662260988992", "author": "Mark Donoghoe ", "committer": "Mark Donoghoe ", "message": "Increment version number\n", "time": 1743975868 }, "_maintainer": { "name": "Mark W. Donoghoe", "email": "markdonoghoe@gmail.com", "login": "mdonoghoe", "uuid": 11401835, "orcid": "0000-0003-0212-6443" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.0.1", "role": "Depends" }, { "package": "splines", "role": "Imports" }, { "package": "glm2", "role": "Imports" }, { "package": "turboEM", "version": ">= 2021.1", "role": "Imports" }, { "package": "Matrix", "role": "Imports" }, { "package": "itertools2", "role": "Imports" }, { "package": "iterators", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "vctrs", "role": "Suggests" } ], "_owner": "mdonoghoe", "_selfowned": true, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 13, "_contributors": [ { "user": "mdonoghoe", "count": 137, "uuid": 11401835 } ], "_userbio": { "uuid": 11401835, "type": "user", "name": "Mark Donoghoe" }, "_downloads": { "count": 518, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/logbin" }, "_mentions": 2, "_devurl": "https://github.com/mdonoghoe/logbin", "_searchresults": 70, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/logbin.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/mdonoghoe/logbin", "_realowner": "mdonoghoe", "_cranurl": true, "_releases": [ { "version": "1.0", "date": "2014-10-16" }, { "version": "1.2", "date": "2015-05-12" }, { "version": "2.0", "date": "2016-07-18" }, { "version": "2.0.1", "date": "2016-07-18" }, { "version": "2.0.2", "date": "2017-03-07" }, { "version": "2.0.3", "date": "2017-05-05" }, { "version": "2.0.4", "date": "2018-08-31" }, { "version": "2.0.5", "date": "2021-08-09" }, { "version": "2.0.6", "date": "2025-04-04" } ], "_exports": [ "anova.logbin", "anova.logbinlist", "B", "confint.logbin", "Iso", "logbin", "logbin.control", "logbin.smooth", "nplbin", "plot.logbin.smooth", "predict.logbin", "predict.logbin.smooth", "print.summary.logbin", "summary.logbin", "vcov.logbin" ], "_help": [ { "page": "logbin-package", "title": "Relative Risk Regression Using the Log-Binomial Model", "topics": [ "logbin-package" ] }, { "page": "anova.logbin", "title": "Analysis of Deviance for logbin Fits", "topics": [ "anova.logbin", "anova.logbinlist" ] }, { "page": "B.Iso", "title": "Defining Smooths in logbin.smooth Formulae", "topics": [ "B", "Iso" ] }, { "page": "confint.logbin", "title": "Confidence Intervals for logbin Model Parameters", "topics": [ "confint.logbin" ] }, { "page": "logbin", "title": "Log-Binomial Regression", "concept": [ "Binomial regression", "CEM algorithm" ], "topics": [ "logbin" ] }, { "page": "logbin.control", "title": "Auxiliary for Controlling logbin Fitting", "topics": [ "logbin.control" ] }, { "page": "logbin.smooth", "title": "Smooth Log-Binomial Regression", "topics": [ "logbin.smooth" ] }, { "page": "nplbin", "title": "Non-Positive Log-Binomial Regression", "topics": [ "nplbin" ] }, { "page": "plot.logbin.smooth", "title": "Default logbin.smooth Plotting", "topics": [ "plot.logbin.smooth" ] }, { "page": "predict.logbin", "title": "Predict Method for logbin Fits", "topics": [ "predict.logbin" ] }, { "page": "predict.logbin.smooth", "title": "Predict Method for logbin.smooth Fits", "topics": [ "predict.logbin.smooth" ] }, { "page": "summary.logbin", "title": "Summarising logbin Model Fits", "topics": [ "print.summary.logbin", "summary.logbin" ] }, { "page": "vcov.logbin", "title": "Calculate Variance-Covariance Matrix for a Fitted logbin Model Object", "topics": [ "vcov.logbin" ] } ], "_readme": "https://github.com/mdonoghoe/logbin/raw/HEAD/README.md", "_rundeps": [ "codetools", "doParallel", "foreach", "glm2", "iterators", "itertools2", "lattice", "MASS", "Matrix", "MatrixModels", "numDeriv", "quantreg", "SparseM", "survival", "turboEM" ], "_score": 5.4361626470407565, "_indexed": true, "_nocasepkg": "logbin", "_universes": [ "mdonoghoe" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.0.6.9000", "date": "2026-05-09T08:47:16.000Z", "distro": "noble", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "c330cad8b458d7e8d4284d87f558ee7ea1366691d236f0c23173c9cf05151b09", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.6.0", "os": "linux", "version": "2.0.6.9000", "date": "2026-05-09T08:47:14.000Z", "distro": "noble", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "d4cb274e202d504b9b3a740e0a59485ac3d8b52703cc884e3d1540fff5c4695a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.5.3", "os": "mac", "version": "2.0.6.9000", "date": "2026-05-09T08:47:01.000Z", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "ddadfc6b00cd23785ff009921b96efc8c04867374ce8fb357e51ad514eb0fc66", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.6.0", "os": "mac", "version": "2.0.6.9000", "date": "2026-05-09T08:46:39.000Z", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "c567351b7869e6c6b82d7ffe1782c6676ca95028ada4bdc250736a1d96b4798f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.7.0", "os": "win", "version": "2.0.6.9000", "date": "2026-05-09T08:46:28.000Z", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "a68d988676427d02c982a2c4b28b0f74a2b9f65d84575de50acdf7d9d2a12ba7", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.5.3", "os": "win", "version": "2.0.6.9000", "date": "2026-05-09T08:46:27.000Z", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "d801d081e59e82e01bf6fd4901cab8113373cc9f140bf054804538b48ec383f4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.6.0", "os": "win", "version": "2.0.6.9000", "date": "2026-05-09T08:46:27.000Z", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "decdff689ba0d142609aaf5672dcf0908c3d678406d0782bbc13995322a956e4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" }, { "r": "4.6.0", "os": "wasm", "version": "2.0.6.9000", "date": "2026-05-22T13:02:39.000Z", "commit": "5c4966853f7043909d2c9961265e662260988992", "fileid": "ac00007732756a0421ab3004d5e5733739553820ad913e7e45539604a8b05834", "status": "success", "buildurl": "https://github.com/r-universe/mdonoghoe/actions/runs/25596797657" } ] }